Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Breast.Breast.cls #Breast_30-39_versus_Breast_70-79.Breast.cls #Breast_30-39_versus_Breast_70-79_repos |
| Phenotype | Breast.cls#Breast_30-39_versus_Breast_70-79_repos |
| Upregulated in class | Breast_70-79 |
| GeneSet | GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION_OF_ENDOGENOUS_ANTIGEN |
| Enrichment Score (ES) | -0.6847887 |
| Normalized Enrichment Score (NES) | -1.598924 |
| Nominal p-value | 0.047325104 |
| FDR q-value | 0.6215759 |
| FWER p-Value | 0.874 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | ERAP1 | NA | 2309 | 0.440 | 0.0175 | No |
| 2 | IDE | NA | 3980 | 0.375 | 0.0377 | No |
| 3 | HFE | NA | 7457 | 0.290 | 0.0134 | No |
| 4 | ABCB9 | NA | 15348 | 0.169 | -0.1082 | No |
| 5 | ATG5 | NA | 15552 | 0.167 | -0.0892 | No |
| 6 | CD1E | NA | 19058 | 0.123 | -0.1367 | No |
| 7 | CD1C | NA | 20243 | 0.108 | -0.1437 | No |
| 8 | CD1B | NA | 21237 | 0.097 | -0.1488 | No |
| 9 | AZGP1 | NA | 24663 | 0.060 | -0.2033 | No |
| 10 | CD1A | NA | 30372 | 0.018 | -0.3055 | No |
| 11 | TAPBP | NA | 30615 | 0.017 | -0.3076 | No |
| 12 | CD1D | NA | 44239 | -0.065 | -0.5483 | No |
| 13 | HLA-G | NA | 45353 | -0.081 | -0.5577 | No |
| 14 | ERAP2 | NA | 46852 | -0.105 | -0.5709 | No |
| 15 | TAP2 | NA | 47111 | -0.110 | -0.5607 | No |
| 16 | HLA-H | NA | 53882 | -0.309 | -0.6428 | Yes |
| 17 | TAP1 | NA | 54062 | -0.335 | -0.6006 | Yes |
| 18 | HLA-A | NA | 54414 | -0.439 | -0.5474 | Yes |
| 19 | HLA-DRA | NA | 54422 | -0.444 | -0.4873 | Yes |
| 20 | B2M | NA | 54426 | -0.445 | -0.4268 | Yes |
| 21 | HLA-F | NA | 54455 | -0.467 | -0.3638 | Yes |
| 22 | CD74 | NA | 54486 | -0.487 | -0.2983 | Yes |
| 23 | HLA-DRB1 | NA | 54537 | -0.541 | -0.2257 | Yes |
| 24 | HLA-E | NA | 54547 | -0.553 | -0.1508 | Yes |
| 25 | HLA-B | NA | 54552 | -0.557 | -0.0752 | Yes |
| 26 | HLA-C | NA | 54554 | -0.559 | 0.0007 | Yes |
