| Dataset | Breast.Breast.cls #Breast_30-39_versus_Breast_70-79.Breast.cls #Breast_30-39_versus_Breast_70-79_repos |
| Phenotype | Breast.cls#Breast_30-39_versus_Breast_70-79_repos |
| Upregulated in class | Breast_70-79 |
| GeneSet | GOBP_ANTIMICROBIAL_HUMORAL_IMMUNE_RESPONSE_MEDIATED_BY_ANTIMICROBIAL_PEPTIDE |
| Enrichment Score (ES) | -0.404898 |
| Normalized Enrichment Score (NES) | -1.2587237 |
| Nominal p-value | 0.11891892 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.998 |

| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PGC | NA | 5822 | 0.325 | -0.0776 | No |
| 2 | FAM3A | NA | 8040 | 0.278 | -0.0932 | No |
| 3 | CXCL13 | NA | 10995 | 0.229 | -0.1268 | No |
| 4 | MUC7 | NA | 11073 | 0.228 | -0.1077 | No |
| 5 | REG3G | NA | 11604 | 0.220 | -0.0976 | No |
| 6 | REG3A | NA | 11762 | 0.218 | -0.0809 | No |
| 7 | DEFB118 | NA | 12392 | 0.210 | -0.0736 | No |
| 8 | GALP | NA | 13220 | 0.198 | -0.0709 | No |
| 9 | DEFA6 | NA | 13376 | 0.195 | -0.0562 | No |
| 10 | DEFA5 | NA | 13438 | 0.194 | -0.0398 | No |
| 11 | REG1B | NA | 14157 | 0.184 | -0.0364 | No |
| 12 | CXCL6 | NA | 14860 | 0.176 | -0.0335 | No |
| 13 | REG1A | NA | 15539 | 0.167 | -0.0309 | No |
| 14 | PLA2G1B | NA | 16700 | 0.153 | -0.0384 | No |
| 15 | PGLYRP4 | NA | 17404 | 0.144 | -0.0383 | No |
| 16 | LTF | NA | 18426 | 0.131 | -0.0452 | No |
| 17 | RNASE6 | NA | 19397 | 0.119 | -0.0523 | No |
| 18 | CXCL5 | NA | 20343 | 0.107 | -0.0600 | No |
| 19 | SEMG1 | NA | 20583 | 0.105 | -0.0550 | No |
| 20 | KLK5 | NA | 20713 | 0.103 | -0.0481 | No |
| 21 | HRG | NA | 21179 | 0.098 | -0.0478 | No |
| 22 | PF4V1 | NA | 21251 | 0.097 | -0.0404 | No |
| 23 | DEFB4A | NA | 22290 | 0.085 | -0.0518 | No |
| 24 | S100A7 | NA | 23012 | 0.077 | -0.0581 | No |
| 25 | ANG | NA | 23702 | 0.070 | -0.0644 | No |
| 26 | KLK7 | NA | 25525 | 0.052 | -0.0932 | No |
| 27 | KLK3 | NA | 26115 | 0.047 | -0.0998 | No |
| 28 | KRT6A | NA | 28113 | 0.032 | -0.1335 | No |
| 29 | IL17A | NA | 29037 | 0.026 | -0.1481 | No |
| 30 | SPAG11A | NA | 31842 | 0.011 | -0.1985 | No |
| 31 | DEFB127 | NA | 32797 | 0.008 | -0.2153 | No |
| 32 | SPAG11B | NA | 37992 | 0.000 | -0.3106 | No |
| 33 | NOD2 | NA | 41039 | -0.024 | -0.3643 | No |
| 34 | RPS19 | NA | 42919 | -0.048 | -0.3944 | No |
| 35 | CXCL14 | NA | 43023 | -0.049 | -0.3919 | No |
| 36 | CAMP | NA | 43154 | -0.050 | -0.3898 | No |
| 37 | BPIFA1 | NA | 43275 | -0.052 | -0.3873 | No |
| 38 | DEFA1 | NA | 43802 | -0.059 | -0.3916 | No |
| 39 | F2 | NA | 44044 | -0.062 | -0.3904 | No |
| 40 | RPL39 | NA | 44139 | -0.064 | -0.3864 | No |
| 41 | CXCL2 | NA | 45149 | -0.078 | -0.3978 | Yes |
| 42 | DEFB126 | NA | 45345 | -0.081 | -0.3941 | Yes |
| 43 | CCL13 | NA | 45642 | -0.086 | -0.3918 | Yes |
| 44 | RNASE7 | NA | 46307 | -0.096 | -0.3954 | Yes |
| 45 | IL17F | NA | 46645 | -0.101 | -0.3924 | Yes |
| 46 | CXCL3 | NA | 46874 | -0.105 | -0.3871 | Yes |
| 47 | ELANE | NA | 47085 | -0.109 | -0.3812 | Yes |
| 48 | RNASE3 | NA | 47257 | -0.112 | -0.3742 | Yes |
| 49 | HMGN2 | NA | 47393 | -0.114 | -0.3664 | Yes |
| 50 | PGLYRP3 | NA | 48275 | -0.131 | -0.3708 | Yes |
| 51 | GNLY | NA | 49036 | -0.145 | -0.3717 | Yes |
| 52 | DEFA1B | NA | 49796 | -0.162 | -0.3710 | Yes |
| 53 | GAPDH | NA | 50120 | -0.169 | -0.3618 | Yes |
| 54 | SPINK5 | NA | 50445 | -0.176 | -0.3519 | Yes |
| 55 | ROMO1 | NA | 51187 | -0.194 | -0.3480 | Yes |
| 56 | RPL30 | NA | 51577 | -0.204 | -0.3368 | Yes |
| 57 | PGLYRP1 | NA | 53264 | -0.258 | -0.3444 | Yes |
| 58 | DEFB1 | NA | 53308 | -0.262 | -0.3217 | Yes |
| 59 | DEFA4 | NA | 53312 | -0.262 | -0.2982 | Yes |
| 60 | S100A9 | NA | 53584 | -0.282 | -0.2778 | Yes |
| 61 | CXCL10 | NA | 53640 | -0.286 | -0.2531 | Yes |
| 62 | CXCL1 | NA | 53731 | -0.294 | -0.2283 | Yes |
| 63 | CXCL9 | NA | 53759 | -0.297 | -0.2021 | Yes |
| 64 | CXCL11 | NA | 54059 | -0.334 | -0.1775 | Yes |
| 65 | S100A12 | NA | 54225 | -0.369 | -0.1473 | Yes |
| 66 | PPBP | NA | 54235 | -0.372 | -0.1140 | Yes |
| 67 | DEFA3 | NA | 54336 | -0.406 | -0.0793 | Yes |
| 68 | PF4 | NA | 54448 | -0.463 | -0.0397 | Yes |
| 69 | CXCL8 | NA | 54458 | -0.470 | 0.0024 | Yes |

