Details for gene set GOBP_LYSOSOMAL

Table: GSEA Results Summary

Dataset	Breast.Breast.cls #Breast_30-39_versus_Breast_70-79.Breast.cls #Breast_30-39_versus_Breast_70-79_repos
Phenotype	Breast.cls#Breast_30-39_versus_Breast_70-79_repos
Upregulated in class	Breast_30-39
GeneSet	GOBP_LYSOSOMAL_TRANSPORT
Enrichment Score (ES)	0.65284854
Normalized Enrichment Score (NES)	1.8071036
Nominal p-value	0.0
FDR q-value	0.8077459
FWER p-Value	0.32

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP13A2	NA	188	0.681	0.0190	Yes
2	VPS33A	NA	335	0.629	0.0371	Yes
3	VPS18	NA	571	0.582	0.0520	Yes
4	AP3M1	NA	623	0.573	0.0700	Yes
5	NCOA4	NA	773	0.553	0.0855	Yes
6	KIF13A	NA	942	0.536	0.1001	Yes
7	TGFBRAP1	NA	976	0.532	0.1171	Yes
8	ALS2	NA	1136	0.518	0.1313	Yes
9	SORT1	NA	1238	0.509	0.1462	Yes
10	TRAK1	NA	1465	0.491	0.1583	Yes
11	AP1G1	NA	1483	0.489	0.1741	Yes
12	ANKFY1	NA	1678	0.477	0.1863	Yes
13	CACNG8	NA	1776	0.469	0.2000	Yes
14	NAGPA	NA	2030	0.454	0.2104	Yes
15	HGSNAT	NA	2086	0.451	0.2243	Yes
16	IGF2R	NA	2327	0.439	0.2344	Yes
17	VPS4B	NA	2362	0.438	0.2482	Yes
18	VPS39	NA	2386	0.436	0.2622	Yes
19	ZFYVE16	NA	2596	0.427	0.2724	Yes
20	GNPTAB	NA	2681	0.423	0.2848	Yes
21	AP3D1	NA	2825	0.416	0.2960	Yes
22	SNX16	NA	2839	0.416	0.3095	Yes
23	MTM1	NA	2916	0.412	0.3217	Yes
24	RBSN	NA	3041	0.408	0.3329	Yes
25	VPS11	NA	3042	0.408	0.3463	Yes
26	VPS54	NA	3178	0.403	0.3572	Yes
27	SCARB2	NA	3276	0.399	0.3686	Yes
28	VPS41	NA	3371	0.396	0.3799	Yes
29	VPS35	NA	3595	0.388	0.3886	Yes
30	LRP1	NA	3758	0.382	0.3982	Yes
31	HOOK2	NA	3802	0.380	0.4100	Yes
32	CLEC16A	NA	3849	0.378	0.4216	Yes
33	VAMP7	NA	3864	0.378	0.4339	Yes
34	TMEM106B	NA	3997	0.374	0.4438	Yes
35	VPS53	NA	4159	0.369	0.4530	Yes
36	HGS	NA	4170	0.369	0.4650	Yes
37	SNX27	NA	4474	0.360	0.4714	Yes
38	VPS4A	NA	4481	0.360	0.4831	Yes
39	AP3B1	NA	4493	0.360	0.4948	Yes
40	VPS52	NA	4991	0.346	0.4971	Yes
41	EPG5	NA	5021	0.345	0.5080	Yes
42	VPS16	NA	5144	0.342	0.5170	Yes
43	SORL1	NA	5570	0.331	0.5201	Yes
44	GRN	NA	5685	0.328	0.5288	Yes
45	GGA3	NA	5841	0.324	0.5367	Yes
46	CHMP3	NA	6062	0.319	0.5432	Yes
47	TRAK2	NA	6152	0.317	0.5520	Yes
48	ATG14	NA	6374	0.312	0.5583	Yes
49	HOOK3	NA	6481	0.310	0.5666	Yes
50	UBXN6	NA	6837	0.302	0.5700	Yes
51	SCYL2	NA	6851	0.302	0.5798	Yes
52	GCC2	NA	6886	0.301	0.5891	Yes
53	PINK1	NA	7180	0.296	0.5935	Yes
54	EHD3	NA	7201	0.295	0.6029	Yes
55	FAM160A2	NA	7241	0.294	0.6119	Yes
56	SPTBN5	NA	7384	0.291	0.6189	Yes
57	VPS51	NA	7737	0.284	0.6218	Yes
58	M6PR	NA	8553	0.269	0.6157	Yes
59	RAB12	NA	8709	0.267	0.6217	Yes
60	CCDC91	NA	8717	0.266	0.6304	Yes
61	USE1	NA	8738	0.266	0.6388	Yes
62	PSAP	NA	8774	0.265	0.6469	Yes
63	BIN1	NA	9229	0.257	0.6470	Yes
64	VIPAS39	NA	9480	0.253	0.6508	Yes
65	SNAPIN	NA	9815	0.247	0.6528	Yes
66	ARSB	NA	10951	0.230	0.6396	No
67	GAK	NA	11664	0.219	0.6338	No
68	LAMP1	NA	12298	0.211	0.6291	No
69	CDX2	NA	12825	0.203	0.6262	No
70	MGRN1	NA	13296	0.196	0.6240	No
71	HOOK1	NA	13374	0.195	0.6291	No
72	VCP	NA	13405	0.195	0.6349	No
73	AP4M1	NA	15375	0.169	0.6044	No
74	DTX3L	NA	15470	0.168	0.6082	No
75	LRRK2	NA	15895	0.163	0.6058	No
76	RAB7B	NA	16457	0.156	0.6006	No
77	HMGXB4	NA	16535	0.155	0.6043	No
78	LAMP2	NA	17036	0.149	0.6001	No
79	CLU	NA	17160	0.147	0.6027	No
80	AKTIP	NA	17403	0.144	0.6030	No
81	CLN3	NA	18819	0.126	0.5812	No
82	TSG101	NA	19066	0.123	0.5807	No
83	BECN2	NA	20324	0.107	0.5612	No
84	NEDD4	NA	20989	0.100	0.5523	No
85	RNF157	NA	22726	0.080	0.5231	No
86	CACNG4	NA	23131	0.076	0.5182	No
87	GPRASP1	NA	23247	0.075	0.5185	No
88	DENND3	NA	23519	0.072	0.5159	No
89	NPC1	NA	23944	0.068	0.5104	No
90	MVB12A	NA	24209	0.065	0.5077	No
91	LYST	NA	29633	0.022	0.4089	No
92	RAB7A	NA	30138	0.020	0.4003	No
93	CHMP2B	NA	33749	0.003	0.3341	No
94	HSPA1A	NA	39308	-0.003	0.2322	No
95	HSPA8	NA	39913	-0.011	0.2214	No
96	PCDHGA3	NA	41491	-0.029	0.1935	No
97	PCSK9	NA	42943	-0.048	0.1684	No
98	CHMP5	NA	43360	-0.053	0.1625	No
99	ADRB2	NA	43362	-0.053	0.1643	No
100	CACNG7	NA	43846	-0.060	0.1574	No
101	CACNG2	NA	44804	-0.073	0.1422	No
102	C9orf72	NA	44870	-0.074	0.1435	No
103	CACNG5	NA	45981	-0.091	0.1261	No
104	STX8	NA	46000	-0.091	0.1288	No
105	RILP	NA	46105	-0.093	0.1300	No
106	LAPTM5	NA	46576	-0.100	0.1247	No
107	WASH3P	NA	46600	-0.101	0.1276	No
108	ARF1	NA	46706	-0.102	0.1290	No
109	RHOB	NA	51638	-0.206	0.0453	No
110	CACNG3	NA	53420	-0.269	0.0215	No