DatasetBreast.Breast.cls
#Breast_30-39_versus_Breast_70-79.Breast.cls
#Breast_30-39_versus_Breast_70-79_repos
PhenotypeBreast.cls#Breast_30-39_versus_Breast_70-79_repos
Upregulated in classBreast_30-39
GeneSetGOBP_RETROGRADE_TRANSPORT_ENDOSOME_TO_GOLGI
Enrichment Score (ES)0.6412475
Normalized Enrichment Score (NES)1.6692116
Nominal p-value0.0037243948
FDR q-value0.24442409
FWER p-Value0.754
Table: GSEA Results Summary



Fig 1: Enrichment plot: GOBP_RETROGRADE_TRANSPORT_ENDOSOME_TO_GOLGI   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VPS26BNA110.8760.0341Yes
2ERC1NA2020.6720.0570Yes
3YKT6NA2570.6520.0815Yes
4RGP1NA2590.6520.1070Yes
5TBC1D14NA2970.6390.1314Yes
6TBC1D5NA2990.6380.1564Yes
7SNX1NA5300.5880.1752Yes
8HEATR5BNA8060.5500.1917Yes
9GOSR1NA9810.5320.2093Yes
10USP7NA11110.5200.2273Yes
11PIKFYVENA13530.4990.2425Yes
12RAB6BNA14760.4900.2594Yes
13HEATR5ANA15020.4880.2781Yes
14CLTCNA15400.4860.2964Yes
15ANKFY1NA16780.4770.3126Yes
16RIC1NA17820.4690.3291Yes
17DCTN1NA21120.4500.3407Yes
18EVI5NA21150.4500.3583Yes
19SNX8NA23870.4360.3704Yes
20TRAPPC10NA25160.4300.3849Yes
21VTI1BNA26530.4240.3990Yes
22VPS29NA26990.4220.4147Yes
23RBSNNA30410.4080.4244Yes
24VPS54NA31780.4030.4377Yes
25STX16NA33080.3980.4510Yes
26RAB29NA34420.3930.4639Yes
27VPS35NA35950.3880.4763Yes
28SNX5NA37200.3830.4891Yes
29TMEM87BNA39020.3770.5005Yes
30VPS53NA41590.3690.5103Yes
31WASHC2ANA43600.3630.5208Yes
32VPS52NA49910.3460.5228Yes
33TBC1D17NA54310.3340.5278Yes
34GOSR2NA56590.3290.5365Yes
35TRIM27NA57600.3260.5475Yes
36SNX32NA63510.3130.5489Yes
37GCC2NA68860.3010.5509Yes
38GBF1NA69660.3000.5612Yes
39EHD3NA72010.2950.5685Yes
40PREPLNA74900.2890.5745Yes
41VPS51NA77370.2840.5812Yes
42TMEM87ANA78580.2820.5900Yes
43MAGEL2NA79450.2800.5994Yes
44RAB41NA89660.2620.5909Yes
45TBC1D10BNA94750.2530.5915Yes
46WASHC2CNA100470.2440.5906Yes
47ARFIP1NA104220.2380.5931Yes
48CLTCL1NA104910.2370.6011Yes
49RAB9BNA105600.2360.6091Yes
50STX6NA107900.2320.6139Yes
51SGSM2NA108560.2310.6218Yes
52BET1LNA114860.2220.6190Yes
53SNX12NA115310.2210.6268Yes
54GGA1NA115400.2210.6353Yes
55RAB6CNA122930.2110.6298Yes
56VPS26ANA124420.2090.6352Yes
57TBC1D10CNA133280.1960.6267Yes
58ARL1NA133700.1950.6336Yes
59SNX2NA133710.1950.6412Yes
60RHOBTB3NA141840.1840.6336No
61TBC1D23NA150950.1730.6236No
62WASH6PNA152660.1710.6272No
63STX10NA152950.1700.6333No
64UBE2ONA158160.1640.6302No
65LRRK2NA158950.1630.6351No
66RAB7BNA164570.1560.6310No
67DENND5ANA170920.1480.6251No
68SNX6NA192350.1210.5906No
69PLEKHJ1NA206990.1030.5678No
70ARFRP1NA213090.0960.5603No
71RAB6ANA216220.0920.5582No
72BAIAP3NA218580.0900.5574No
73VTI1ANA238520.0680.5236No
74VAMP3NA244040.0630.5159No
75SPAG9NA244760.0620.5170No
76CLN5NA274570.0360.4638No
77TBC1D10ANA285470.0290.4450No
78RAB7ANA301380.0200.4165No
79RAB9ANA39802-0.0090.2396No
80SNX3NA45467-0.0830.1390No
81WASH3PNA46600-0.1010.1221No
82RNF126NA46754-0.1030.1234No
83WASHC1NA47632-0.1190.1119No
84STX5NA51123-0.1920.0554No
85DENND2ANA51741-0.2080.0523No
Table: GSEA details [plain text format]



Fig 2: GOBP_RETROGRADE_TRANSPORT_ENDOSOME_TO_GOLGI   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GOBP_RETROGRADE_TRANSPORT_ENDOSOME_TO_GOLGI: Random ES distribution   
Gene set null distribution of ES for GOBP_RETROGRADE_TRANSPORT_ENDOSOME_TO_GOLGI