DatasetThyroid.Thyroid.cls
#Thyroid_30-39_versus_Thyroid_70-79.Thyroid.cls
#Thyroid_30-39_versus_Thyroid_70-79_repos
PhenotypeThyroid.cls#Thyroid_30-39_versus_Thyroid_70-79_repos
Upregulated in classThyroid_30-39
GeneSetGOBP_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION
Enrichment Score (ES)0.36038846
Normalized Enrichment Score (NES)1.1011841
Nominal p-value0.32413793
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GOBP_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1AXLNA530.4990.0173Yes
2TYROBPNA1520.4250.0310Yes
3C5AR2NA1670.4190.0461Yes
4CX3CR1NA1740.4170.0613Yes
5LILRA2NA2810.3820.0733Yes
6IL37NA3090.3740.0865Yes
7FADDNA3760.3600.0984Yes
8TREX1NA4370.3500.1101Yes
9PIK3R1NA4880.3410.1217Yes
10CD33NA5780.3270.1320Yes
11CD14NA5850.3260.1439Yes
12HAVCR2NA6410.3210.1546Yes
13ANGPT1NA7560.3090.1638Yes
14UBE2J1NA8190.3040.1738Yes
15RIPK1NA8800.2970.1836Yes
16CD36NA9260.2920.1934Yes
17TLR1NA11040.2760.2003Yes
18CLEC7ANA11540.2730.2094Yes
19CD34NA12160.2690.2181Yes
20CD86NA13250.2610.2257Yes
21MYD88NA13670.2590.2344Yes
22CCR2NA14300.2550.2426Yes
23LPLNA15370.2490.2498Yes
24FOXP3NA15960.2460.2577Yes
25TLR4NA19300.2310.2600Yes
26TIRAPNA19670.2290.2677Yes
27LTFNA19830.2290.2758Yes
28JAK2NA22640.2180.2787Yes
29TNFRSF8NA23170.2160.2856Yes
30LILRA4NA23710.2140.2925Yes
31AKAP8NA24820.2100.2981Yes
32ADIPOQNA26690.2030.3022Yes
33SYT11NA27260.2010.3085Yes
34CIDEANA28260.1980.3139Yes
35PTAFRNA29490.1940.3188Yes
36MIR140NA32110.1860.3208Yes
37TLR3NA32860.1840.3261Yes
38TREM2NA35420.1760.3279Yes
39VSIRNA37660.1700.3300Yes
40DDX58NA39770.1650.3322Yes
41LGALS9NA41330.1610.3353Yes
42GHRLNA43480.1560.3370Yes
43NOD2NA44980.1520.3399Yes
44IL10NA46700.1490.3422Yes
45LEPNA49360.1430.3425Yes
46WNT5ANA51250.1400.3442Yes
47BPINA55150.1320.3419Yes
48IFIH1NA57150.1280.3429Yes
49SPNNA58400.1260.3452Yes
50SASH3NA60460.1220.3460Yes
51CD2NA60530.1220.3503Yes
52PTPN11NA60650.1220.3546Yes
53LILRB1NA61570.1210.3573Yes
54CARD9NA62290.1190.3604Yes
55ORM2NA66710.1120.3564No
56MMP8NA69690.1070.3548No
57ORM1NA72460.1030.3535No
58PYCARDNA73520.1010.3553No
59MIR181A2NA74880.0990.3565No
60LY96NA75340.0980.3592No
61MIR27BNA89750.0780.3356No
62NR1H4NA98160.0680.3227No
63PTPN6NA103930.0620.3144No
64IL1ANA105030.0600.3146No
65PTPRCNA107600.0580.3120No
66CHRNA7NA113460.0520.3031No
67DHX9NA118950.0460.2947No
68POMCNA126040.0400.2832No
69MIR657NA126130.0400.2845No
70SELENOKNA128640.0380.2813No
71TMEM106ANA131950.0350.2765No
72MIR149NA133290.0340.2753No
73IGF1NA141530.0280.2612No
74SYKNA142020.0280.2613No
75MIR204NA142040.0280.2623No
76IL17FNA143350.0270.2609No
77ARG2NA155130.0190.2400No
78IL17ANA155830.0180.2394No
79NLRC3NA159730.0160.2328No
80CX3CL1NA166650.0120.2206No
81APPNA167790.0120.2189No
82LILRA5NA168200.0120.2186No
83SLAMF1NA169120.0110.2174No
84PSEN1NA173790.0090.2091No
85RASGRP1NA174780.0090.2076No
86PTPN22NA182030.0050.1945No
87TLR2NA186490.0030.1865No
88GSTP1NA187640.0030.1845No
89MIR206NA211670.0000.1404No
90MIR105-1NA212460.0000.1389No
91MIR361NA216570.0000.1314No
92DEFB114NA231720.0000.1036No
93MIR101-1NA234150.0000.0991No
94MIR488NA238990.0000.0903No
95MIR98NA246670.0000.0762No
96IL33NA25866-0.0070.0544No
97IFNGR1NA26069-0.0100.0511No
98BCL10NA26199-0.0110.0491No
99IL27RANA26246-0.0110.0487No
100ARRB2NA26587-0.0140.0429No
101RARANA26705-0.0160.0414No
102C1QTNF4NA29876-0.046-0.0152No
103IRAK3NA30155-0.048-0.0186No
104IL12BNA30171-0.049-0.0171No
105SELENOSNA30376-0.051-0.0189No
106HDAC2NA30522-0.052-0.0197No
107GHSRNA31254-0.059-0.0310No
108STAT3NA33467-0.081-0.0687No
109MIR130ANA33636-0.082-0.0687No
110HLA-ENA33665-0.083-0.0662No
111CCL3NA34524-0.091-0.0786No
112MIR125B1NA34621-0.092-0.0770No
113TSPONA34989-0.096-0.0802No
114CLUNA35202-0.098-0.0805No
115MIR132NA35454-0.100-0.0815No
116IL23ANA35556-0.102-0.0796No
117TWIST1NA35796-0.104-0.0802No
118SPHK2NA36137-0.107-0.0825No
119CYBANA37003-0.116-0.0942No
120SIRPANA37171-0.117-0.0930No
121ARFGEF2NA37173-0.117-0.0887No
122MIR920NA37364-0.120-0.0878No
123TNFAIP3NA37838-0.124-0.0919No
124IL6NA38829-0.135-0.1052No
125CLEC4ANA39082-0.138-0.1048No
126IFNGNA39805-0.146-0.1127No
127PTPRJNA40391-0.153-0.1178No
128MIR708NA40983-0.160-0.1228No
129ZFP36NA41704-0.169-0.1298No
130CCL19NA41896-0.172-0.1271No
131DICER1NA42249-0.176-0.1271No
132THBS1NA42420-0.179-0.1237No
133MAPKAPK2NA42521-0.180-0.1189No
134LBPNA42622-0.181-0.1141No
135MIFNA43879-0.198-0.1299No
136FOXP1NA44223-0.203-0.1288No
137ADAM8NA44518-0.207-0.1266No
138FRMD8NA45081-0.215-0.1291No
139DDTNA45389-0.220-0.1267No
140FZD5NA45487-0.222-0.1203No
141BCL3NA46892-0.245-0.1371No
142MAVSNA47058-0.249-0.1311No
143ZC3H12ANA47386-0.254-0.1278No
144CD47NA47805-0.262-0.1259No
145AZU1NA48507-0.276-0.1287No
146TICAM1NA48576-0.277-0.1198No
147TLR9NA48781-0.282-0.1133No
148CD274NA49116-0.289-0.1088No
149RIPK2NA49236-0.292-0.1003No
150PF4NA49702-0.302-0.0978No
151HSPB1NA50134-0.312-0.0943No
152AGERNA51337-0.346-0.1037No
153NFATC4NA51446-0.350-0.0929No
154TRIM27NA51623-0.355-0.0831No
155MC1RNA52142-0.374-0.0790No
156NOD1NA52624-0.392-0.0735No
157IL4NA52635-0.393-0.0593No
158CACTINNA52893-0.405-0.0492No
159GAS6NA52894-0.405-0.0344No
160ISL1NA53237-0.426-0.0251No
161HMGB1NA53239-0.426-0.0095No
162NFKBIL1NA53297-0.4290.0051No
163ARHGEF2NA54186-0.5100.0074No
Table: GSEA details [plain text format]



Fig 2: GOBP_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GOBP_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION: Random ES distribution   
Gene set null distribution of ES for GOBP_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION